Lab meeting schedule 2023

Meetings for 2023 Spring Semester is scheduled at Friday 11:00AM in my zoom. We will have 1 presenter (1 hour followed by discussions) or 2 presenters (35 min per person followed by discussions) at each meeting. The contents to present should best be a summary of your work in progress although well prepared journal clubs and tutorials are welcome. If you present a journal article please share the paper with the group on slack a few days prior to the meeting.

  • Jan 13, Xuanhe (xQTL meta-data & data descriptor)
  • Jan 20, Zining (ROSMAP latest proteomics), Jiajun (replication analysis)
  • Jan 27, Hao (xQTL monthly update)
  • Feb 3, Haochen (QTL pairwise colocalization), Diana (UKB RASP system tutorial)
  • Feb 10, Xuewei (Colocalization methodology)
  • Feb 17, Sarah Kim-Hellmuth (guest speaker)
  • Feb 24, Xuanhe (sQTL updates), Fabiha (Neuronal annotation resource updates)
  • March 3, Hao (xQTL monthly update)
  • March 10, Group discussion, organized by Francesca
  • March 17, Postdoc candidate job talk
  • March 24, Zining (metabolomics and QTL), Jiajun (pQTL fine-mapping)
  • March 31, Xuanhe (sQTL updates), Haochen (TAD / TAD-B for genome-wide fine-mapping)
  • April 7, Ru (multivariate QTL)
  • April 14, Hao (mfSuSiE and xQTL monthly update)
  • April 21, Rui (Mendelian Randomization)
  • April 28, Haochen and Xuewei (Colocalization simulation studies)
  • May 5, Postdoc candidate job talk
  • May 12, No meeting — BoG conference
  • May 19, Amanda (genotype imputation panels)
  • May 25, guest seminar by Dr. Yanxiang Deng, UPenn on spatial-omics technology
  • June 2, Elnaz
  • June 9, 16, 23 No meeting — GW traveling
  • June 30, Hao (xQTL project update)
  • July 7, Ru (unproductive splicing and sQTL)
  • July 14, Zining (multi-omics imputation)
  • July 21, Jiacheng (introduction to container and updated xQTL protocol containerization)
  • July 28, No meeting — GW traveling
  • Aug 4, Anjing (quantile regression analysis)
  • Aug 11, presenter cancelled
  • Aug 18, HPC discussion & Yifei (trans QTL introduction)
  • Aug 25, HPC discussion
  • Sept 1, No meeting — Labor Day vacation
  • Sept 8, ChatGPT
  • Sept 15, Haochen (multi-omics colocalization)
  • Sept 22, Anqi (PhD project on MR)
  • Sept 29, Anqi (PhD project on TWAS; TWAS and MR connection, xQTL MR results)
  • Oct 6, Zining (multi-omics imputation — chalk + figures), Gao (research update — chalk)
  • Oct 13, Anjing (quantile QTL update — chalk + figures), Yifei (ARCHIE analysis update — chalk + figures)
  • Oct 20, Xuewei/Ru/Yanghyeon (SuSiE^2 introduction — chalk + figures)
  • Oct 27, Ru & Gao (xQTL project update — chalk + figures)
  • Nov 3, No meeting — ASHG
  • Nov 10, Xuewei & Haochen (multi-omics colocalization — figures only)
  • Nov 17, Yanghyeon (TBD — chalk)
  • Nov 24, No meeting — Thanksgiving
  • Dec 1, Ru (sQTL update — chalk + figures)
  • Dec 8, Updates from new students
  • Dec 15, Manuscript discussion
  • Dec 22, End of year gathering & random chats