Pipelines and benchmarks developed by members of the lab
This is a curated list of pipelines and computational benchmarks made in the lab, at the level of maturity and quality of engineering good enough to be used by other research groups in the community.
On this page you can find a list of software developed by Gao Wang during his graduate and post-graduate trainings.
- SEQLinkage 2.0, a upgrade to SEQLinkage described in Wang et al (2015).
- pediviz, a tool to visualize large and complex pedigrees.
- A collection of in-house draft pipelines. Unpolished, contributed by group members, intended for internal use at this point.
- Molecular phenotype QTL analysis pipelines. This resource was developed for ADSP FG Brain xQTL project but can be applied to other molecular QTL analysis projects.